Permit requirements vary considerably depending on the local planning authorities. They may include septic, utilities, drainage and energy compliance as well as the actual construction permit. Often, engineering approval is also required.
Your construction drawings will meet all normal local requirements and will need to be engineer- stamped in some cases. Contact your local planning authorities to determine the best procedure to get permits approved as smoothly as possible. This may involve a personal appearance by yourself or your builder at a specified time or may simply require submission of plans. Remember the time taken to obtain permits should be factored in to allow a realistic expectation of when you can expect to be living in your new home.